BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023E01SP1|AL428058
(1031 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1276 1989 0.0
>3x_Contig1276
Length = 6662
Score = 1989 bits (1001), Expect = 0.0
Identities = 1025/1033 (99%), Gaps = 2/1033 (0%)
Strand = Plus / Minus
Query: 1 gatcttgagaactcagaaggatccctggtagctaaacgttctaacgcatcaccaaatgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5765 gatcttgagaactcagaaggatccctggtagctaaacgttctaacgcatcaccaaatgca 5706
Query: 61 ccatcatcatcatcatcattaagtctgctcaaatgatttaagtattcatcgtcagttggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5705 ccatcatcatcatcatcattaagtctgctcaaatgatttaagtattcatcgtcagttggc 5646
Query: 121 gagatagtaggtaaaaatatgttatcaccggaagtggcaacgtggaaggtaacaccattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5645 gagatagtaggtaaaaatatgttatcaccggaagtggcaacgtggaaggtaacaccattc 5586
Query: 181 ttcgaagaaagaagtcttggtcttaataatccacggtcagccaagtaatttagcaaacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5585 ttcgaagaaagaagtcttggtcttaataatccacggtcagccaagtaatttagcaaacac 5526
Query: 241 gttttggcagtttttttcctgttcacgacggtgttgctgatctgcgaaccagtcgcactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5525 gttttggcagtttttttcctgttcacgacggtgttgctgatctgcgaaccagtcgcactg 5466
Query: 301 aaagcggtcgatacccttgtmatcctcctgcccaaacaattctcctcaaagtcatcatca 360
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 5465 aaagcggtcgatacccttgtaatcctcctgcccaaacaattctcctcaaagtcatcatca 5406
Query: 361 tcaccttcatcatctccatcgttttcattgtctggaccgtcatattcatcatcatcttca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5405 tcaccttcatcatctccatcgttttcattgtctggaccgtcatattcatcatcatcttca 5346
Query: 421 tcatcgcttaccacagagaaaggtccaccacgttcgtcatcattagacattctacgatta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5345 tcatcgcttaccacagagaaaggtccaccacgttcgtcatcattagacattctacgatta 5286
Query: 481 ggctgactctgaaatctgctcggttgtwaagatgatgtgtagatgtcattgcctaggtct 540
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5285 ggctgactctgaaatctgctcggttgtaaagatgatgtgtagatgtcattgcctaggtct 5226
Query: 541 ccatcagaatcgttgcctccaaggctataatccaacagactgctatctccttgatcctcg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5225 ccatcagaatcgttgcctccaaggctataatccaacagactgctatctccttgatcctcg 5166
Query: 601 tcaatttcgttatcagttccttcttccgaagacatcgctaattcgttctgtggggctccg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5165 tcaatttcgttatcagttccttcttccgaagacatcgctaattcgttctgtggggctccg 5106
Query: 661 taatcttgatatccatagatagaatacggcgttccaaaggccatcatcggactgaatcct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5105 taatcttgatatccatagatagaatacggcgttccaaaggccatcatcggactgaatcct 5046
Query: 721 gcaggcatagcagaagtgccatatgcgccactgggccgtctggaagatgccctacgagcg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5045 gcaggcatagcagaagtgccatatgcgccactgggccgtctggaagatgccctacgagcg 4986
Query: 781 ctattagagcttggtacacttgcggaacgtccattactgtttgaccttgaaagggtagaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4985 ctattagagcttggtacacttgcggaacgtccattactgtttgaccttgaaagggtagaa 4926
Query: 841 ccactactttttgacccgctagctcctaagatggatgcaaatgcttgcttgattgacg-a 899
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 4925 ccactactttttgacccgctagctcctaagatggatgcaaatgcttgcttgattgacgaa 4866
Query: 900 gatcttttcctattcccatccttctgctttccagaggacga-cccmgatgtgaactgaaa 958
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 4865 gatcttttcctattcccatccttctgctttccagaggacgaccccagatgtgaactgaaa 4806
Query: 959 aatgacattatcttccaaccgtcgtggacctgttaaatctcagcttatctctcaaaargg 1018
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 4805 aatgacattatcttccaaccgtcgtggacctgtaaaatctcagcttatctctcaaaaggg 4746
Query: 1019 gttggttacttac 1031
||||||||||||
Sbjct: 4745 tttggttacttac 4733
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8271
Number of Sequences: 1807
Number of extensions: 8271
Number of successful extensions: 466
Number of sequences better than 1.0e-20: 1
length of query: 1031
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1015
effective length of database: 10,329,639
effective search space: 10484583585
effective search space used: 10484583585
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)